
Weill Cornell Medicine
Microbiome Core
Unlock the secrets of The Microbiome with our Weill Cornell Medicine Microbiome Core’s sequencing services. Founded by the Jill Roberts Institute for Research in Inflammatory Bowel Disease of Weill Cornell Medicine, we provide institutional access to high-quality, affordable, and user-friendly microbiome sequencing to enrich clinical and basic research.
*For research use only. Not for medical or diagnostic use*
Our Services
Comprehensive Microbial Sequencing Services

Our 16S rRNA Sequencing services enable precise microbial community profiling, identifying bacterial taxa in your samples with unparalleled accuracy, and supporting diverse microbiome research projects.
Our Oxford Nanopore Long-Read Sequencing services offer extended read lengths, facilitating the resolution of complex genomic structures within your samples and enhancing the depth and breadth of microbiome exploration.
Our laboratory uses cutting-edge Shotgun Metagenomic Sequencing to provide comprehensive insights into microbial genomes. These insights allow researchers to uncover taxonomic composition & functional profiling.

Bioinformatics Analysis
We provide robust bioinformatics analysis, transforming raw microbiome sequencing data into meaningful biological metrics and figures. These include interactive PCoA and alpha/beta diversity plots, and gene and pathway abundance charts tailored to your research objectives.
How It Works
Seamless Workflow from Sample to Insight
Sample Submission
Submit your project requests to our sequencing laboratory using Agilent iLab. Specialized tubes and custom labels will be provided.
Nucleic Acid Isolation & Library Generation
Samples are processed via our high-throughput Promega & Hamilton robotics systems.
Library Sequencing
Microbiome sequencing is performed using the Illumina platform MiSeq & NovaSeq X sequencers.
Analysis & Results
​Your results are delivered online anywhere in the world via PubShare.
The Importance of High-quality Sequencing in Microbiome Research
High-quality microbial sequencing is essential for unraveling the intricate dynamics of microbiome interactions and their implications on health and disease. Accurate genomic insights facilitate the identification of microbial taxa and their functional capabilities.
Our laboratory's advanced sequencing services and robust bioinformatics support enable researchers to generate reliable data that drives innovative discoveries and contributes to microbiome science.
Pricing
Affordable Access to Microbiome Sequencing
16S Sequencing starts as low as just $100 per sample, and Shotgun Metagenomic Sequencing starts as low as $200 per sample.
Larger sample submissions may be eligible for a discount.
Exact pricing varies according to the requirements of each unique project, so please contact us for more information.
FAQs
Explore our frequently asked questions to enhance your understanding of our services. See our complete FAQs for more information.